In [1]:
import tensorflow
import tensorflow as tf
import tensorflow.keras as keras
import tensorflow.keras.applications as ka
import numpy as np
import sys
import os
import boto3
from sagemaker import get_execution_role
from PIL import Image
import urllib.request

role = get_execution_role()

import matplotlib
import matplotlib.pyplot as plt
# plt.rcParams["figure.figsize"]=5,5
In [2]:
# Source: https://stackoverflow.com/questions/49772151/download-a-folder-from-s3-using-boto3

s3 = boto3.Session().resource('s3')

def download_s3_folder(bucket_name, s3_folder, local_dir=None):
    """
    Download the contents of a folder directory
    Args:
        bucket_name: the name of the s3 bucket
        s3_folder: the folder path in the s3 bucket
        local_dir: a relative or absolute directory path in the local file system
    """
    bucket = s3.Bucket(bucket_name)
    for obj in bucket.objects.filter(Prefix=s3_folder):
        target = obj.key if local_dir is None \
            else os.path.join(local_dir, os.path.relpath(obj.key, s3_folder))
        if not os.path.exists(os.path.dirname(target)):
            os.makedirs(os.path.dirname(target))
        if obj.key[-1] == '/':
            continue
        bucket.download_file(obj.key, target)
        

# download_s3_folder('imagenettrain', 's3_train_batch_1.0', './data/train_nest/train/')
# download_s3_folder('imagenettrain', 's3_train_batch_2.0', './data/train_nest/train/')
# # download_s3_folder('imagenettrain', 's3_train_batch_3.0', './data/train_nest/train/')
# download_s3_folder('imagenettrain', 's3_train_batch_4.0', './data/train_nest/train/')
# download_s3_folder('imagenettrain', 's3_train_batch_5.0', './data/train_nest/train/')
# download_s3_folder('imagenettrain', 's3_train_batch_6.0', './data/train_nest/train/')

# download_s3_folder('imagenettrain', 's3_train_batch_8.0', './data/validation_nest/validation/')
In [3]:
# Load resnet50 as base model:
base_model = ka.ResNet50(
                        weights='imagenet',
                        input_shape = (224, 224, 3)
                        )

# Handoff:
handoff_layer = base_model.layers[-3].output

# Single Pathway Bottlenecked at 2048 handoff input above:
ae_gmp = keras.layers.GlobalMaxPool2D()(handoff_layer)
ae_dense_1 = keras.layers.Dense(4096, activation='relu')(ae_gmp)
ae_dense_2 = keras.layers.Dense(25088, activation='relu')(ae_dense_1)
ae_reshape = keras.layers.Reshape((7, 7, 512))(ae_dense_2)
ae_conv1 = keras.layers.Conv2D(256, (4, 4), padding = 'same', activation='relu')(ae_reshape)
ae_up_1 = keras.layers.UpSampling2D((2, 2))(ae_conv1)
ae_conv2 = keras.layers.Conv2D(128, (4, 4), padding = 'same', activation='relu')(ae_up_1)
ae_up_2 = keras.layers.UpSampling2D((2, 2))(ae_conv2)
ae_conv3 = keras.layers.Conv2D(56, (4, 4), padding = 'same', activation='relu')(ae_up_2)
ae_up_3 = keras.layers.UpSampling2D((2, 2))(ae_conv3)
ae_conv4 = keras.layers.Conv2D(28, (4, 4), padding = 'same', activation='relu')(ae_up_3)
ae_up_4 = keras.layers.UpSampling2D((2, 2))(ae_conv4)
ae_conv5 = keras.layers.Conv2D(28, (4, 4), padding = 'same', activation='relu')(ae_up_4)
ae_up_5 = keras.layers.UpSampling2D((2, 2))(ae_conv5)
ae_conv6 = keras.layers.Conv2D(3, (4, 4), padding = 'same', activation='relu')(ae_up_5)

# Define the model that includes our decoding layers:
model = keras.Model(inputs = [base_model.input], outputs = ae_conv6)
# Define optimizer:
opt = keras.optimizers.Adam(learning_rate = 0.0001)
# Compile model:
model.compile(optimizer = opt, loss = 'mse')

# Describe:
model.summary()
Model: "model"
__________________________________________________________________________________________________
Layer (type)                    Output Shape         Param #     Connected to                     
==================================================================================================
input_1 (InputLayer)            [(None, 224, 224, 3) 0                                            
__________________________________________________________________________________________________
conv1_pad (ZeroPadding2D)       (None, 230, 230, 3)  0           input_1[0][0]                    
__________________________________________________________________________________________________
conv1_conv (Conv2D)             (None, 112, 112, 64) 9472        conv1_pad[0][0]                  
__________________________________________________________________________________________________
conv1_bn (BatchNormalization)   (None, 112, 112, 64) 256         conv1_conv[0][0]                 
__________________________________________________________________________________________________
conv1_relu (Activation)         (None, 112, 112, 64) 0           conv1_bn[0][0]                   
__________________________________________________________________________________________________
pool1_pad (ZeroPadding2D)       (None, 114, 114, 64) 0           conv1_relu[0][0]                 
__________________________________________________________________________________________________
pool1_pool (MaxPooling2D)       (None, 56, 56, 64)   0           pool1_pad[0][0]                  
__________________________________________________________________________________________________
conv2_block1_1_conv (Conv2D)    (None, 56, 56, 64)   4160        pool1_pool[0][0]                 
__________________________________________________________________________________________________
conv2_block1_1_bn (BatchNormali (None, 56, 56, 64)   256         conv2_block1_1_conv[0][0]        
__________________________________________________________________________________________________
conv2_block1_1_relu (Activation (None, 56, 56, 64)   0           conv2_block1_1_bn[0][0]          
__________________________________________________________________________________________________
conv2_block1_2_conv (Conv2D)    (None, 56, 56, 64)   36928       conv2_block1_1_relu[0][0]        
__________________________________________________________________________________________________
conv2_block1_2_bn (BatchNormali (None, 56, 56, 64)   256         conv2_block1_2_conv[0][0]        
__________________________________________________________________________________________________
conv2_block1_2_relu (Activation (None, 56, 56, 64)   0           conv2_block1_2_bn[0][0]          
__________________________________________________________________________________________________
conv2_block1_0_conv (Conv2D)    (None, 56, 56, 256)  16640       pool1_pool[0][0]                 
__________________________________________________________________________________________________
conv2_block1_3_conv (Conv2D)    (None, 56, 56, 256)  16640       conv2_block1_2_relu[0][0]        
__________________________________________________________________________________________________
conv2_block1_0_bn (BatchNormali (None, 56, 56, 256)  1024        conv2_block1_0_conv[0][0]        
__________________________________________________________________________________________________
conv2_block1_3_bn (BatchNormali (None, 56, 56, 256)  1024        conv2_block1_3_conv[0][0]        
__________________________________________________________________________________________________
conv2_block1_add (Add)          (None, 56, 56, 256)  0           conv2_block1_0_bn[0][0]          
                                                                 conv2_block1_3_bn[0][0]          
__________________________________________________________________________________________________
conv2_block1_out (Activation)   (None, 56, 56, 256)  0           conv2_block1_add[0][0]           
__________________________________________________________________________________________________
conv2_block2_1_conv (Conv2D)    (None, 56, 56, 64)   16448       conv2_block1_out[0][0]           
__________________________________________________________________________________________________
conv2_block2_1_bn (BatchNormali (None, 56, 56, 64)   256         conv2_block2_1_conv[0][0]        
__________________________________________________________________________________________________
conv2_block2_1_relu (Activation (None, 56, 56, 64)   0           conv2_block2_1_bn[0][0]          
__________________________________________________________________________________________________
conv2_block2_2_conv (Conv2D)    (None, 56, 56, 64)   36928       conv2_block2_1_relu[0][0]        
__________________________________________________________________________________________________
conv2_block2_2_bn (BatchNormali (None, 56, 56, 64)   256         conv2_block2_2_conv[0][0]        
__________________________________________________________________________________________________
conv2_block2_2_relu (Activation (None, 56, 56, 64)   0           conv2_block2_2_bn[0][0]          
__________________________________________________________________________________________________
conv2_block2_3_conv (Conv2D)    (None, 56, 56, 256)  16640       conv2_block2_2_relu[0][0]        
__________________________________________________________________________________________________
conv2_block2_3_bn (BatchNormali (None, 56, 56, 256)  1024        conv2_block2_3_conv[0][0]        
__________________________________________________________________________________________________
conv2_block2_add (Add)          (None, 56, 56, 256)  0           conv2_block1_out[0][0]           
                                                                 conv2_block2_3_bn[0][0]          
__________________________________________________________________________________________________
conv2_block2_out (Activation)   (None, 56, 56, 256)  0           conv2_block2_add[0][0]           
__________________________________________________________________________________________________
conv2_block3_1_conv (Conv2D)    (None, 56, 56, 64)   16448       conv2_block2_out[0][0]           
__________________________________________________________________________________________________
conv2_block3_1_bn (BatchNormali (None, 56, 56, 64)   256         conv2_block3_1_conv[0][0]        
__________________________________________________________________________________________________
conv2_block3_1_relu (Activation (None, 56, 56, 64)   0           conv2_block3_1_bn[0][0]          
__________________________________________________________________________________________________
conv2_block3_2_conv (Conv2D)    (None, 56, 56, 64)   36928       conv2_block3_1_relu[0][0]        
__________________________________________________________________________________________________
conv2_block3_2_bn (BatchNormali (None, 56, 56, 64)   256         conv2_block3_2_conv[0][0]        
__________________________________________________________________________________________________
conv2_block3_2_relu (Activation (None, 56, 56, 64)   0           conv2_block3_2_bn[0][0]          
__________________________________________________________________________________________________
conv2_block3_3_conv (Conv2D)    (None, 56, 56, 256)  16640       conv2_block3_2_relu[0][0]        
__________________________________________________________________________________________________
conv2_block3_3_bn (BatchNormali (None, 56, 56, 256)  1024        conv2_block3_3_conv[0][0]        
__________________________________________________________________________________________________
conv2_block3_add (Add)          (None, 56, 56, 256)  0           conv2_block2_out[0][0]           
                                                                 conv2_block3_3_bn[0][0]          
__________________________________________________________________________________________________
conv2_block3_out (Activation)   (None, 56, 56, 256)  0           conv2_block3_add[0][0]           
__________________________________________________________________________________________________
conv3_block1_1_conv (Conv2D)    (None, 28, 28, 128)  32896       conv2_block3_out[0][0]           
__________________________________________________________________________________________________
conv3_block1_1_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block1_1_conv[0][0]        
__________________________________________________________________________________________________
conv3_block1_1_relu (Activation (None, 28, 28, 128)  0           conv3_block1_1_bn[0][0]          
__________________________________________________________________________________________________
conv3_block1_2_conv (Conv2D)    (None, 28, 28, 128)  147584      conv3_block1_1_relu[0][0]        
__________________________________________________________________________________________________
conv3_block1_2_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block1_2_conv[0][0]        
__________________________________________________________________________________________________
conv3_block1_2_relu (Activation (None, 28, 28, 128)  0           conv3_block1_2_bn[0][0]          
__________________________________________________________________________________________________
conv3_block1_0_conv (Conv2D)    (None, 28, 28, 512)  131584      conv2_block3_out[0][0]           
__________________________________________________________________________________________________
conv3_block1_3_conv (Conv2D)    (None, 28, 28, 512)  66048       conv3_block1_2_relu[0][0]        
__________________________________________________________________________________________________
conv3_block1_0_bn (BatchNormali (None, 28, 28, 512)  2048        conv3_block1_0_conv[0][0]        
__________________________________________________________________________________________________
conv3_block1_3_bn (BatchNormali (None, 28, 28, 512)  2048        conv3_block1_3_conv[0][0]        
__________________________________________________________________________________________________
conv3_block1_add (Add)          (None, 28, 28, 512)  0           conv3_block1_0_bn[0][0]          
                                                                 conv3_block1_3_bn[0][0]          
__________________________________________________________________________________________________
conv3_block1_out (Activation)   (None, 28, 28, 512)  0           conv3_block1_add[0][0]           
__________________________________________________________________________________________________
conv3_block2_1_conv (Conv2D)    (None, 28, 28, 128)  65664       conv3_block1_out[0][0]           
__________________________________________________________________________________________________
conv3_block2_1_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block2_1_conv[0][0]        
__________________________________________________________________________________________________
conv3_block2_1_relu (Activation (None, 28, 28, 128)  0           conv3_block2_1_bn[0][0]          
__________________________________________________________________________________________________
conv3_block2_2_conv (Conv2D)    (None, 28, 28, 128)  147584      conv3_block2_1_relu[0][0]        
__________________________________________________________________________________________________
conv3_block2_2_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block2_2_conv[0][0]        
__________________________________________________________________________________________________
conv3_block2_2_relu (Activation (None, 28, 28, 128)  0           conv3_block2_2_bn[0][0]          
__________________________________________________________________________________________________
conv3_block2_3_conv (Conv2D)    (None, 28, 28, 512)  66048       conv3_block2_2_relu[0][0]        
__________________________________________________________________________________________________
conv3_block2_3_bn (BatchNormali (None, 28, 28, 512)  2048        conv3_block2_3_conv[0][0]        
__________________________________________________________________________________________________
conv3_block2_add (Add)          (None, 28, 28, 512)  0           conv3_block1_out[0][0]           
                                                                 conv3_block2_3_bn[0][0]          
__________________________________________________________________________________________________
conv3_block2_out (Activation)   (None, 28, 28, 512)  0           conv3_block2_add[0][0]           
__________________________________________________________________________________________________
conv3_block3_1_conv (Conv2D)    (None, 28, 28, 128)  65664       conv3_block2_out[0][0]           
__________________________________________________________________________________________________
conv3_block3_1_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block3_1_conv[0][0]        
__________________________________________________________________________________________________
conv3_block3_1_relu (Activation (None, 28, 28, 128)  0           conv3_block3_1_bn[0][0]          
__________________________________________________________________________________________________
conv3_block3_2_conv (Conv2D)    (None, 28, 28, 128)  147584      conv3_block3_1_relu[0][0]        
__________________________________________________________________________________________________
conv3_block3_2_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block3_2_conv[0][0]        
__________________________________________________________________________________________________
conv3_block3_2_relu (Activation (None, 28, 28, 128)  0           conv3_block3_2_bn[0][0]          
__________________________________________________________________________________________________
conv3_block3_3_conv (Conv2D)    (None, 28, 28, 512)  66048       conv3_block3_2_relu[0][0]        
__________________________________________________________________________________________________
conv3_block3_3_bn (BatchNormali (None, 28, 28, 512)  2048        conv3_block3_3_conv[0][0]        
__________________________________________________________________________________________________
conv3_block3_add (Add)          (None, 28, 28, 512)  0           conv3_block2_out[0][0]           
                                                                 conv3_block3_3_bn[0][0]          
__________________________________________________________________________________________________
conv3_block3_out (Activation)   (None, 28, 28, 512)  0           conv3_block3_add[0][0]           
__________________________________________________________________________________________________
conv3_block4_1_conv (Conv2D)    (None, 28, 28, 128)  65664       conv3_block3_out[0][0]           
__________________________________________________________________________________________________
conv3_block4_1_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block4_1_conv[0][0]        
__________________________________________________________________________________________________
conv3_block4_1_relu (Activation (None, 28, 28, 128)  0           conv3_block4_1_bn[0][0]          
__________________________________________________________________________________________________
conv3_block4_2_conv (Conv2D)    (None, 28, 28, 128)  147584      conv3_block4_1_relu[0][0]        
__________________________________________________________________________________________________
conv3_block4_2_bn (BatchNormali (None, 28, 28, 128)  512         conv3_block4_2_conv[0][0]        
__________________________________________________________________________________________________
conv3_block4_2_relu (Activation (None, 28, 28, 128)  0           conv3_block4_2_bn[0][0]          
__________________________________________________________________________________________________
conv3_block4_3_conv (Conv2D)    (None, 28, 28, 512)  66048       conv3_block4_2_relu[0][0]        
__________________________________________________________________________________________________
conv3_block4_3_bn (BatchNormali (None, 28, 28, 512)  2048        conv3_block4_3_conv[0][0]        
__________________________________________________________________________________________________
conv3_block4_add (Add)          (None, 28, 28, 512)  0           conv3_block3_out[0][0]           
                                                                 conv3_block4_3_bn[0][0]          
__________________________________________________________________________________________________
conv3_block4_out (Activation)   (None, 28, 28, 512)  0           conv3_block4_add[0][0]           
__________________________________________________________________________________________________
conv4_block1_1_conv (Conv2D)    (None, 14, 14, 256)  131328      conv3_block4_out[0][0]           
__________________________________________________________________________________________________
conv4_block1_1_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block1_1_conv[0][0]        
__________________________________________________________________________________________________
conv4_block1_1_relu (Activation (None, 14, 14, 256)  0           conv4_block1_1_bn[0][0]          
__________________________________________________________________________________________________
conv4_block1_2_conv (Conv2D)    (None, 14, 14, 256)  590080      conv4_block1_1_relu[0][0]        
__________________________________________________________________________________________________
conv4_block1_2_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block1_2_conv[0][0]        
__________________________________________________________________________________________________
conv4_block1_2_relu (Activation (None, 14, 14, 256)  0           conv4_block1_2_bn[0][0]          
__________________________________________________________________________________________________
conv4_block1_0_conv (Conv2D)    (None, 14, 14, 1024) 525312      conv3_block4_out[0][0]           
__________________________________________________________________________________________________
conv4_block1_3_conv (Conv2D)    (None, 14, 14, 1024) 263168      conv4_block1_2_relu[0][0]        
__________________________________________________________________________________________________
conv4_block1_0_bn (BatchNormali (None, 14, 14, 1024) 4096        conv4_block1_0_conv[0][0]        
__________________________________________________________________________________________________
conv4_block1_3_bn (BatchNormali (None, 14, 14, 1024) 4096        conv4_block1_3_conv[0][0]        
__________________________________________________________________________________________________
conv4_block1_add (Add)          (None, 14, 14, 1024) 0           conv4_block1_0_bn[0][0]          
                                                                 conv4_block1_3_bn[0][0]          
__________________________________________________________________________________________________
conv4_block1_out (Activation)   (None, 14, 14, 1024) 0           conv4_block1_add[0][0]           
__________________________________________________________________________________________________
conv4_block2_1_conv (Conv2D)    (None, 14, 14, 256)  262400      conv4_block1_out[0][0]           
__________________________________________________________________________________________________
conv4_block2_1_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block2_1_conv[0][0]        
__________________________________________________________________________________________________
conv4_block2_1_relu (Activation (None, 14, 14, 256)  0           conv4_block2_1_bn[0][0]          
__________________________________________________________________________________________________
conv4_block2_2_conv (Conv2D)    (None, 14, 14, 256)  590080      conv4_block2_1_relu[0][0]        
__________________________________________________________________________________________________
conv4_block2_2_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block2_2_conv[0][0]        
__________________________________________________________________________________________________
conv4_block2_2_relu (Activation (None, 14, 14, 256)  0           conv4_block2_2_bn[0][0]          
__________________________________________________________________________________________________
conv4_block2_3_conv (Conv2D)    (None, 14, 14, 1024) 263168      conv4_block2_2_relu[0][0]        
__________________________________________________________________________________________________
conv4_block2_3_bn (BatchNormali (None, 14, 14, 1024) 4096        conv4_block2_3_conv[0][0]        
__________________________________________________________________________________________________
conv4_block2_add (Add)          (None, 14, 14, 1024) 0           conv4_block1_out[0][0]           
                                                                 conv4_block2_3_bn[0][0]          
__________________________________________________________________________________________________
conv4_block2_out (Activation)   (None, 14, 14, 1024) 0           conv4_block2_add[0][0]           
__________________________________________________________________________________________________
conv4_block3_1_conv (Conv2D)    (None, 14, 14, 256)  262400      conv4_block2_out[0][0]           
__________________________________________________________________________________________________
conv4_block3_1_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block3_1_conv[0][0]        
__________________________________________________________________________________________________
conv4_block3_1_relu (Activation (None, 14, 14, 256)  0           conv4_block3_1_bn[0][0]          
__________________________________________________________________________________________________
conv4_block3_2_conv (Conv2D)    (None, 14, 14, 256)  590080      conv4_block3_1_relu[0][0]        
__________________________________________________________________________________________________
conv4_block3_2_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block3_2_conv[0][0]        
__________________________________________________________________________________________________
conv4_block3_2_relu (Activation (None, 14, 14, 256)  0           conv4_block3_2_bn[0][0]          
__________________________________________________________________________________________________
conv4_block3_3_conv (Conv2D)    (None, 14, 14, 1024) 263168      conv4_block3_2_relu[0][0]        
__________________________________________________________________________________________________
conv4_block3_3_bn (BatchNormali (None, 14, 14, 1024) 4096        conv4_block3_3_conv[0][0]        
__________________________________________________________________________________________________
conv4_block3_add (Add)          (None, 14, 14, 1024) 0           conv4_block2_out[0][0]           
                                                                 conv4_block3_3_bn[0][0]          
__________________________________________________________________________________________________
conv4_block3_out (Activation)   (None, 14, 14, 1024) 0           conv4_block3_add[0][0]           
__________________________________________________________________________________________________
conv4_block4_1_conv (Conv2D)    (None, 14, 14, 256)  262400      conv4_block3_out[0][0]           
__________________________________________________________________________________________________
conv4_block4_1_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block4_1_conv[0][0]        
__________________________________________________________________________________________________
conv4_block4_1_relu (Activation (None, 14, 14, 256)  0           conv4_block4_1_bn[0][0]          
__________________________________________________________________________________________________
conv4_block4_2_conv (Conv2D)    (None, 14, 14, 256)  590080      conv4_block4_1_relu[0][0]        
__________________________________________________________________________________________________
conv4_block4_2_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block4_2_conv[0][0]        
__________________________________________________________________________________________________
conv4_block4_2_relu (Activation (None, 14, 14, 256)  0           conv4_block4_2_bn[0][0]          
__________________________________________________________________________________________________
conv4_block4_3_conv (Conv2D)    (None, 14, 14, 1024) 263168      conv4_block4_2_relu[0][0]        
__________________________________________________________________________________________________
conv4_block4_3_bn (BatchNormali (None, 14, 14, 1024) 4096        conv4_block4_3_conv[0][0]        
__________________________________________________________________________________________________
conv4_block4_add (Add)          (None, 14, 14, 1024) 0           conv4_block3_out[0][0]           
                                                                 conv4_block4_3_bn[0][0]          
__________________________________________________________________________________________________
conv4_block4_out (Activation)   (None, 14, 14, 1024) 0           conv4_block4_add[0][0]           
__________________________________________________________________________________________________
conv4_block5_1_conv (Conv2D)    (None, 14, 14, 256)  262400      conv4_block4_out[0][0]           
__________________________________________________________________________________________________
conv4_block5_1_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block5_1_conv[0][0]        
__________________________________________________________________________________________________
conv4_block5_1_relu (Activation (None, 14, 14, 256)  0           conv4_block5_1_bn[0][0]          
__________________________________________________________________________________________________
conv4_block5_2_conv (Conv2D)    (None, 14, 14, 256)  590080      conv4_block5_1_relu[0][0]        
__________________________________________________________________________________________________
conv4_block5_2_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block5_2_conv[0][0]        
__________________________________________________________________________________________________
conv4_block5_2_relu (Activation (None, 14, 14, 256)  0           conv4_block5_2_bn[0][0]          
__________________________________________________________________________________________________
conv4_block5_3_conv (Conv2D)    (None, 14, 14, 1024) 263168      conv4_block5_2_relu[0][0]        
__________________________________________________________________________________________________
conv4_block5_3_bn (BatchNormali (None, 14, 14, 1024) 4096        conv4_block5_3_conv[0][0]        
__________________________________________________________________________________________________
conv4_block5_add (Add)          (None, 14, 14, 1024) 0           conv4_block4_out[0][0]           
                                                                 conv4_block5_3_bn[0][0]          
__________________________________________________________________________________________________
conv4_block5_out (Activation)   (None, 14, 14, 1024) 0           conv4_block5_add[0][0]           
__________________________________________________________________________________________________
conv4_block6_1_conv (Conv2D)    (None, 14, 14, 256)  262400      conv4_block5_out[0][0]           
__________________________________________________________________________________________________
conv4_block6_1_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block6_1_conv[0][0]        
__________________________________________________________________________________________________
conv4_block6_1_relu (Activation (None, 14, 14, 256)  0           conv4_block6_1_bn[0][0]          
__________________________________________________________________________________________________
conv4_block6_2_conv (Conv2D)    (None, 14, 14, 256)  590080      conv4_block6_1_relu[0][0]        
__________________________________________________________________________________________________
conv4_block6_2_bn (BatchNormali (None, 14, 14, 256)  1024        conv4_block6_2_conv[0][0]        
__________________________________________________________________________________________________
conv4_block6_2_relu (Activation (None, 14, 14, 256)  0           conv4_block6_2_bn[0][0]          
__________________________________________________________________________________________________
conv4_block6_3_conv (Conv2D)    (None, 14, 14, 1024) 263168      conv4_block6_2_relu[0][0]        
__________________________________________________________________________________________________
conv4_block6_3_bn (BatchNormali (None, 14, 14, 1024) 4096        conv4_block6_3_conv[0][0]        
__________________________________________________________________________________________________
conv4_block6_add (Add)          (None, 14, 14, 1024) 0           conv4_block5_out[0][0]           
                                                                 conv4_block6_3_bn[0][0]          
__________________________________________________________________________________________________
conv4_block6_out (Activation)   (None, 14, 14, 1024) 0           conv4_block6_add[0][0]           
__________________________________________________________________________________________________
conv5_block1_1_conv (Conv2D)    (None, 7, 7, 512)    524800      conv4_block6_out[0][0]           
__________________________________________________________________________________________________
conv5_block1_1_bn (BatchNormali (None, 7, 7, 512)    2048        conv5_block1_1_conv[0][0]        
__________________________________________________________________________________________________
conv5_block1_1_relu (Activation (None, 7, 7, 512)    0           conv5_block1_1_bn[0][0]          
__________________________________________________________________________________________________
conv5_block1_2_conv (Conv2D)    (None, 7, 7, 512)    2359808     conv5_block1_1_relu[0][0]        
__________________________________________________________________________________________________
conv5_block1_2_bn (BatchNormali (None, 7, 7, 512)    2048        conv5_block1_2_conv[0][0]        
__________________________________________________________________________________________________
conv5_block1_2_relu (Activation (None, 7, 7, 512)    0           conv5_block1_2_bn[0][0]          
__________________________________________________________________________________________________
conv5_block1_0_conv (Conv2D)    (None, 7, 7, 2048)   2099200     conv4_block6_out[0][0]           
__________________________________________________________________________________________________
conv5_block1_3_conv (Conv2D)    (None, 7, 7, 2048)   1050624     conv5_block1_2_relu[0][0]        
__________________________________________________________________________________________________
conv5_block1_0_bn (BatchNormali (None, 7, 7, 2048)   8192        conv5_block1_0_conv[0][0]        
__________________________________________________________________________________________________
conv5_block1_3_bn (BatchNormali (None, 7, 7, 2048)   8192        conv5_block1_3_conv[0][0]        
__________________________________________________________________________________________________
conv5_block1_add (Add)          (None, 7, 7, 2048)   0           conv5_block1_0_bn[0][0]          
                                                                 conv5_block1_3_bn[0][0]          
__________________________________________________________________________________________________
conv5_block1_out (Activation)   (None, 7, 7, 2048)   0           conv5_block1_add[0][0]           
__________________________________________________________________________________________________
conv5_block2_1_conv (Conv2D)    (None, 7, 7, 512)    1049088     conv5_block1_out[0][0]           
__________________________________________________________________________________________________
conv5_block2_1_bn (BatchNormali (None, 7, 7, 512)    2048        conv5_block2_1_conv[0][0]        
__________________________________________________________________________________________________
conv5_block2_1_relu (Activation (None, 7, 7, 512)    0           conv5_block2_1_bn[0][0]          
__________________________________________________________________________________________________
conv5_block2_2_conv (Conv2D)    (None, 7, 7, 512)    2359808     conv5_block2_1_relu[0][0]        
__________________________________________________________________________________________________
conv5_block2_2_bn (BatchNormali (None, 7, 7, 512)    2048        conv5_block2_2_conv[0][0]        
__________________________________________________________________________________________________
conv5_block2_2_relu (Activation (None, 7, 7, 512)    0           conv5_block2_2_bn[0][0]          
__________________________________________________________________________________________________
conv5_block2_3_conv (Conv2D)    (None, 7, 7, 2048)   1050624     conv5_block2_2_relu[0][0]        
__________________________________________________________________________________________________
conv5_block2_3_bn (BatchNormali (None, 7, 7, 2048)   8192        conv5_block2_3_conv[0][0]        
__________________________________________________________________________________________________
conv5_block2_add (Add)          (None, 7, 7, 2048)   0           conv5_block1_out[0][0]           
                                                                 conv5_block2_3_bn[0][0]          
__________________________________________________________________________________________________
conv5_block2_out (Activation)   (None, 7, 7, 2048)   0           conv5_block2_add[0][0]           
__________________________________________________________________________________________________
conv5_block3_1_conv (Conv2D)    (None, 7, 7, 512)    1049088     conv5_block2_out[0][0]           
__________________________________________________________________________________________________
conv5_block3_1_bn (BatchNormali (None, 7, 7, 512)    2048        conv5_block3_1_conv[0][0]        
__________________________________________________________________________________________________
conv5_block3_1_relu (Activation (None, 7, 7, 512)    0           conv5_block3_1_bn[0][0]          
__________________________________________________________________________________________________
conv5_block3_2_conv (Conv2D)    (None, 7, 7, 512)    2359808     conv5_block3_1_relu[0][0]        
__________________________________________________________________________________________________
conv5_block3_2_bn (BatchNormali (None, 7, 7, 512)    2048        conv5_block3_2_conv[0][0]        
__________________________________________________________________________________________________
conv5_block3_2_relu (Activation (None, 7, 7, 512)    0           conv5_block3_2_bn[0][0]          
__________________________________________________________________________________________________
conv5_block3_3_conv (Conv2D)    (None, 7, 7, 2048)   1050624     conv5_block3_2_relu[0][0]        
__________________________________________________________________________________________________
conv5_block3_3_bn (BatchNormali (None, 7, 7, 2048)   8192        conv5_block3_3_conv[0][0]        
__________________________________________________________________________________________________
conv5_block3_add (Add)          (None, 7, 7, 2048)   0           conv5_block2_out[0][0]           
                                                                 conv5_block3_3_bn[0][0]          
__________________________________________________________________________________________________
conv5_block3_out (Activation)   (None, 7, 7, 2048)   0           conv5_block3_add[0][0]           
__________________________________________________________________________________________________
global_max_pooling2d (GlobalMax (None, 2048)         0           conv5_block3_out[0][0]           
__________________________________________________________________________________________________
dense (Dense)                   (None, 4096)         8392704     global_max_pooling2d[0][0]       
__________________________________________________________________________________________________
dense_1 (Dense)                 (None, 25088)        102785536   dense[0][0]                      
__________________________________________________________________________________________________
reshape (Reshape)               (None, 7, 7, 512)    0           dense_1[0][0]                    
__________________________________________________________________________________________________
conv2d (Conv2D)                 (None, 7, 7, 256)    2097408     reshape[0][0]                    
__________________________________________________________________________________________________
up_sampling2d (UpSampling2D)    (None, 14, 14, 256)  0           conv2d[0][0]                     
__________________________________________________________________________________________________
conv2d_1 (Conv2D)               (None, 14, 14, 128)  524416      up_sampling2d[0][0]              
__________________________________________________________________________________________________
up_sampling2d_1 (UpSampling2D)  (None, 28, 28, 128)  0           conv2d_1[0][0]                   
__________________________________________________________________________________________________
conv2d_2 (Conv2D)               (None, 28, 28, 56)   114744      up_sampling2d_1[0][0]            
__________________________________________________________________________________________________
up_sampling2d_2 (UpSampling2D)  (None, 56, 56, 56)   0           conv2d_2[0][0]                   
__________________________________________________________________________________________________
conv2d_3 (Conv2D)               (None, 56, 56, 28)   25116       up_sampling2d_2[0][0]            
__________________________________________________________________________________________________
up_sampling2d_3 (UpSampling2D)  (None, 112, 112, 28) 0           conv2d_3[0][0]                   
__________________________________________________________________________________________________
conv2d_4 (Conv2D)               (None, 112, 112, 28) 12572       up_sampling2d_3[0][0]            
__________________________________________________________________________________________________
up_sampling2d_4 (UpSampling2D)  (None, 224, 224, 28) 0           conv2d_4[0][0]                   
__________________________________________________________________________________________________
conv2d_5 (Conv2D)               (None, 224, 224, 3)  1347        up_sampling2d_4[0][0]            
==================================================================================================
Total params: 137,541,555
Trainable params: 137,488,435
Non-trainable params: 53,120
__________________________________________________________________________________________________
In [4]:
train_directory = './data/train_nest/'
val_directory = './data/validation_nest/'

train_IDG = keras.preprocessing.image.ImageDataGenerator()
val_IDG = keras.preprocessing.image.ImageDataGenerator()

train_gen = train_IDG.flow_from_directory(
    train_directory, 
    target_size=(224, 224),
    color_mode='rgb', 
    class_mode='input', 
    batch_size=64, 
    shuffle=True, 
    seed=13
)

val_gen = val_IDG.flow_from_directory(
    val_directory, 
    target_size=(224, 224),
    color_mode='rgb', 
    class_mode='input', 
    batch_size=64, 
    shuffle=True, 
    seed=13
)
Found 99984 images belonging to 1 classes.
Found 20000 images belonging to 1 classes.
In [ ]:
# save_callback = [keras.callbacks.ModelCheckpoint(filepath='AE_Dense_F4_0001_Callback.h5', save_best_only=True)]
In [ ]:
history1 = model.fit(train_gen, validation_data = val_gen, epochs = 5, shuffle = True, workers = 10, verbose = 1)
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
Train for 1563 steps, validate for 313 steps
Epoch 1/5
1563/1563 [==============================] - 2692s 2s/step - loss: 2966.4368 - val_loss: 1625.2735
Epoch 2/5
1563/1563 [==============================] - 2675s 2s/step - loss: 1519.1263 - val_loss: 1385.8471
Epoch 3/5
1563/1563 [==============================] - 2675s 2s/step - loss: 1203.9834 - val_loss: 1181.5163
Epoch 5/5
1563/1563 [==============================] - 2670s 2s/step - loss: 1136.0297 - val_loss: 1118.7540
In [7]:
history2 = model.fit(train_gen, validation_data = val_gen, epochs = 5, shuffle = True, workers = 10, verbose = 1)
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
Train for 1563 steps, validate for 313 steps
Epoch 1/5
1563/1563 [==============================] - 2676s 2s/step - loss: 1087.2696 - val_loss: 1061.0845
Epoch 2/5
1563/1563 [==============================] - 2671s 2s/step - loss: 1042.2289 - val_loss: 1023.2884
Epoch 3/5
1563/1563 [==============================] - 2676s 2s/step - loss: 1003.6625 - val_loss: 1028.2225
Epoch 4/5
1563/1563 [==============================] - 2675s 2s/step - loss: 971.8372 - val_loss: 950.9565
Epoch 5/5
1563/1563 [==============================] - 2675s 2s/step - loss: 945.9711 - val_loss: 939.1058
In [ ]:
history3 = model.fit(train_gen, validation_data = val_gen, epochs = 5, shuffle = True, workers = 10, verbose = 1)
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
Train for 1563 steps, validate for 313 steps
Epoch 1/5
1563/1563 [==============================] - 2675s 2s/step - loss: 918.8757 - val_loss: 906.1070
Epoch 2/5
1563/1563 [==============================] - 2676s 2s/step - loss: 903.9079 - val_loss: 918.5354
Epoch 3/5
1563/1563 [==============================] - 2671s 2s/step - loss: 884.1852 - val_loss: 895.4223
Epoch 4/5
1563/1563 [==============================] - 2676s 2s/step - loss: 866.6034 - val_loss: 875.4007
Epoch 5/5
1563/1563 [==============================] - 2671s 2s/step - loss: 852.9611 - val_loss: 865.3554
In [ ]:
history4 = model.fit(train_gen, validation_data = val_gen, epochs = 5, shuffle = True, workers = 10, verbose = 1)
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
Train for 1563 steps, validate for 313 steps
Epoch 1/5
1563/1563 [==============================] - 2676s 2s/step - loss: 838.0243 - val_loss: 832.2299
Epoch 2/5
1563/1563 [==============================] - 2673s 2s/step - loss: 825.2300 - val_loss: 826.2338
Epoch 3/5
1563/1563 [==============================] - 2742s 2s/step - loss: 815.1187 - val_loss: 808.8452
Epoch 4/5
1563/1563 [==============================] - 2680s 2s/step - loss: 806.7460 - val_loss: 817.2715
Epoch 5/5
1563/1563 [==============================] - 2675s 2s/step - loss: 795.7510 - val_loss: 805.9596
In [14]:
model.save('AE_Bottleneck_F4_0001_Final_ep_20.h5')
In [15]:
history5 = model.fit(train_gen, validation_data = val_gen, epochs = 5, shuffle = True, workers = 10, verbose = 1)
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
Train for 1563 steps, validate for 313 steps
Epoch 1/5
1563/1563 [==============================] - 2674s 2s/step - loss: 785.4555 - val_loss: 790.6622
Epoch 2/5
1563/1563 [==============================] - 2676s 2s/step - loss: 776.3918 - val_loss: 821.7796
Epoch 3/5
1563/1563 [==============================] - 2670s 2s/step - loss: 770.9285 - val_loss: 769.6513
Epoch 4/5
1563/1563 [==============================] - 2676s 2s/step - loss: 762.4413 - val_loss: 765.7835
Epoch 5/5
1563/1563 [==============================] - 2669s 2s/step - loss: 756.6410 - val_loss: 763.4452
In [16]:
model.save('AE_Bottleneck_F4_0001_Final_ep_25.h5')
In [17]:
history6 = model.fit(train_gen, validation_data = val_gen, epochs = 5, shuffle = True, workers = 10, verbose = 1)
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
WARNING:tensorflow:sample_weight modes were coerced from
  ...
    to  
  ['...']
Train for 1563 steps, validate for 313 steps
Epoch 1/5
1563/1563 [==============================] - 2676s 2s/step - loss: 750.4071 - val_loss: 755.5622
Epoch 2/5
1563/1563 [==============================] - 2675s 2s/step - loss: 743.9533 - val_loss: 756.0494
Epoch 3/5
1563/1563 [==============================] - 2676s 2s/step - loss: 740.6259 - val_loss: 751.5131
Epoch 4/5
1563/1563 [==============================] - 2672s 2s/step - loss: 732.9568 - val_loss: 741.6206
Epoch 5/5
1563/1563 [==============================] - 2676s 2s/step - loss: 729.0341 - val_loss: 734.3042
In [19]:
model.save('AE_Bottleneck_F4_0001_Final_ep_30.h5')
In [20]:
print(history1.history)
print(history2.history)
print(history3.history)
print(history4.history)
{'loss': [2966.8833006054406, 1518.9924855750357, 1309.8057444073863, 1203.8514364642092, 1136.0797945835395], 'val_loss': [1625.2735322702426, 1385.847127798647, 1223.368786309093, 1181.5163283668005, 1118.7540080402605]}
{'loss': [1087.351942521741, 1042.2784596414333, 1003.7679416890296, 971.8556850834415, 945.9751818884772], 'val_loss': [1061.0844627112244, 1023.2883618632063, 1028.2224945945861, 950.9564538535219, 939.1057973258412]}
{'loss': [918.7730250707301, 903.9639669202542, 884.1125424013154, 866.4385669871242, 852.9600782121233], 'val_loss': [906.1069876088883, 918.5353760155626, 895.4222874260558, 875.4006673307084, 865.3554034248327]}
{'loss': [838.1195572834622, 825.3136530067467, 815.1237515385274, 806.6867461489151, 795.7428790559615], 'val_loss': [832.2298884285144, 826.2338475236496, 808.8452062637281, 817.2714798899885, 805.9595853665386]}
In [ ]:
train_loss = history.history['loss']
val_loss = history.history['val_loss']

plt.clf()
plt.plot([str(x) for x in range(1, 21)], train_loss, c = 'c', label = 'Train Loss')
plt.plot([str(x) for x in range(1, 21)], val_loss, c = 'm', label = 'Validation Loss')
plt.legend()
plt.xlabel('Epoch')
plt.ylabel('Loss (MSE)')
plt.title('Learning Curve')

print(train_loss)
print(val_loss)
In [11]:
for i in range(2):
    
    x, y = val_gen.next()
    
    out = model.predict(x)

    
    for j in range(x.shape[0]):
        plt.clf()
        plt.imshow(x[j]/255)
        plt.show()


        plt.clf()
        plt.imshow(out[j]/255)
        plt.show()
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
In [ ]:
 
In [ ]:
# test_model = keras.models.load_model('AE_Simple_F4_0001.h5')
In [ ]:
# test_model.summary()
In [ ]:
 
In [ ]: